BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034E06LP1|AL429911
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1717 0.0
3x_Contig1255 359 6e-99
>3x_Contig1806
Length = 53694
Score = 1717 bits (866), Expect = 0.0
Identities = 873/874 (99%), Gaps = 1/874 (0%)
Strand = Plus / Plus
Query: 1 tttttaatattgagacttagaaaacatgtctaaaagttataaaggttctcaaaatatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41945 tttttaatattgagacttagaaaacatgtctaaaagttataaaggttctcaaaatatgtg 42004
Query: 61 taaagctgtaagcatcattcaattcttttggcgtagataccatcaaggagttgttgtttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42005 taaagctgtaagcatcattcaattcttttggcgtagataccatcaaggagttgttgtttc 42064
Query: 121 acataaatattataatattcatggtagtattttggcacacttctgtgatctctcgttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42065 acataaatattataatattcatggtagtattttggcacacttctgtgatctctcgttatt 42124
Query: 181 ggtttggtttacttttaagaggcaagagtagcatataccgaaccaagtaattccctagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42125 ggtttggtttacttttaagaggcaagagtagcatataccgaaccaagtaattccctagga 42184
Query: 241 cccaggataatgctttgatgtattcatcatagttttaattatttcatttgagtaagttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42185 cccaggataatgctttgatgtattcatcatagttttaattatttcatttgagtaagttta 42244
Query: 301 tttataaattggtatacgtatatatactgcatttaaatatcccgcag-cagcaaatatta 359
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 42245 tttataaattggtatacgtatatatactgcatttaaatatcccgcaggcagcaaatatta 42304
Query: 360 tgaaccctcatatgttttgtttagtcctggtgtttggataagatagcgtcaagaacgtct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42305 tgaaccctcatatgttttgtttagtcctggtgtttggataagatagcgtcaagaacgtct 42364
Query: 420 tgaccgaccttctcctcatattcttcgtctgtcaagtttgattttggaccactatagaac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42365 tgaccgaccttctcctcatattcttcgtctgtcaagtttgattttggaccactatagaac 42424
Query: 480 ttgtacttgtaaacgagatagtaaatcgtaggcaagacccatactgcgccaatgaaaact 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42425 ttgtacttgtaaacgagatagtaaatcgtaggcaagacccatactgcgccaatgaaaact 42484
Query: 540 acactgtagttcatcgtgtctggggtgatgccgtgctgatccgctgggaagaaaactaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42485 acactgtagttcatcgtgtctggggtgatgccgtgctgatccgctgggaagaaaactaat 42544
Query: 600 aatatcatgaaaatttcaaatacgatagaaatccaatttaccactggagaaagatacttc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42545 aatatcatgaaaatttcaaatacgatagaaatccaatttaccactggagaaagatacttc 42604
Query: 660 cccatgaaaaaagcacccggggtgaatacatctttcccataagtcattctcaacaagttt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42605 cccatgaaaaaagcacccggggtgaatacatctttcccataagtcattctcaacaagttt 42664
Query: 720 ggaaccatccaggaaaagtagttcgcagaaacagccaaggagaataatgctgaagatgct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42665 ggaaccatccaggaaaagtagttcgcagaaacagccaaggagaataatgctgaagatgct 42724
Query: 780 actgggccaatcaagcacaaacaaccaatggccaaagcggcaccagcgccgacccaggtt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42725 actgggccaatcaagcacaaacaaccaatggccaaagcggcaccagcgccgacccaggtt 42784
Query: 840 gctctcaatggagacgatagcttgatattgacga 873
||||||||||||||||||||||||||||||||||
Sbjct: 42785 gctctcaatggagacgatagcttgatattgacga 42818
>3x_Contig1255
Length = 5009
Score = 359 bits (181), Expect = 6e-99
Identities = 391/461 (84%)
Strand = Plus / Minus
Query: 396 gataagatagcgtcaagaacgtcttgaccgaccttctcctcatattcttcgtctgtcaag 455
|||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 1936 gataagatagcgtcaagaacgtcttgaccgacgttttcctcgtattcctcgtctgtcaag 1877
Query: 456 tttgattttggaccactatagaacttgtacttgtaaacgagatagtaaatcgtaggcaag 515
|||||||||||||| |||||||||| | |||||||| || ||| ||||| || | ||||
Sbjct: 1876 tttgattttggacctttatagaacttatgcttgtaaatgaaataataaattgttgccaag 1817
Query: 516 acccatactgcgccaatgaaaactacactgtagttcatcgtgtctggggtgatgccgtgc 575
| ||||||||| ||||||||||| |||||||||||||| |||||||| || || || |||
Sbjct: 1816 aaccatactgcaccaatgaaaacaacactgtagttcatagtgtctggagttataccatgc 1757
Query: 576 tgatccgctgggaagaaaactaataatatcatgaaaatttcaaatacgatagaaatccaa 635
|| || | ||| ||||| |||| || ||||||||||| |||||| | ||| |||||||||
Sbjct: 1756 tgttcagttggaaagaagactagtagtatcatgaaaagttcaaagatgatggaaatccaa 1697
Query: 636 tttaccactggagaaagatacttccccatgaaaaaagcacccggggtgaatacatctttc 695
||||| |||||||| || ||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 1696 tttacaactggagagaggtacttccccatgaaaaatgcacccggggtaaacacatcttta 1637
Query: 696 ccataagtcattctcaacaagtttggaaccatccaggaaaagtagttcgcagaaacagcc 755
|| ||||||||||| | ||||||||||| |||||| || |||||||| ||||| | |
Sbjct: 1636 ccgtaagtcattcttagcaagtttggaagcatccatgagaagtagttagcagagatgtac 1577
Query: 756 aaggagaataatgctgaagatgctactgggccaatcaagcacaaacaaccaatggccaaa 815
|| |||||||| |||||||| || |||||||||||||| || | ||| ||||| ||||
Sbjct: 1576 aatgagaataaagctgaagaagcaactgggccaatcaaacatagacatccaatagccagg 1517
Query: 816 gcggcaccagcgccgacccaggttgctctcaatggagacga 856
||| | || ||||| ||||| |||||||| ||||| |||||
Sbjct: 1516 gcgacgcctgcgcctacccaagttgctcttaatggggacga 1476
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6946
Number of Sequences: 1807
Number of extensions: 6946
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 2
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)